A multipurpose toolkit to enable advanced genome engineering in plants T Čermák, SJ Curtin, J Gil-Humanes, R Čegan, TJY Kono, E Konečná, ... The Plant Cell 29 (6), 1196-1217, 2017 | 569 | 2017 |
CRISPR/Cas mutagenesis of soybean and Medicago truncatula using a new web-tool and a modified Cas9 enzyme JM Michno, X Wang, J Liu, SJ Curtin, TJY Kono, RM Stupar GM crops & food 6 (4), 243-252, 2015 | 204 | 2015 |
The role of gene flow in rapid and repeated evolution of cave‐related traits in Mexican tetra, Astyanax mexicanus A Herman, Y Brandvain, J Weagley, WR Jeffery, AC Keene, TJY Kono, ... Molecular ecology 27 (22), 4397-4416, 2018 | 164 | 2018 |
Genome-wide association analysis of stalk biomass and anatomical traits in maize M Mazaheri, M Heckwolf, B Vaillancourt, JL Gage, B Burdo, S Heckwolf, ... BMC plant biology 19, 1-17, 2019 | 108 | 2019 |
The Role of Deleterious Substitutions in Crop Genomes TJY Kono, F Fu, M Mohammadi, PJ Hoffman, C Liu, RM Stupar, KP Smith, ... Molecular Biology and Evolution 33 (9), 2307-2317, 2016 | 87 | 2016 |
Development and genetic characterization of an advanced backcross-nested association mapping (AB-NAM) population of wild× cultivated barley LM Nice, BJ Steffenson, GL Brown-Guedira, ED Akhunov, C Liu, ... Genetics 203 (3), 1453-1467, 2016 | 85 | 2016 |
Genomic variation and DNA repair associated with soybean transgenesis: a comparison to cultivars and mutagenized plants JE Anderson, JM Michno, TJY Kono, AO Stec, BW Campbell, SJ Curtin, ... BMC biotechnology 16, 1-13, 2016 | 68 | 2016 |
Genetic elucidation of interconnected antibiotic pathways mediating maize innate immunity Y Ding, PR Weckwerth, E Poretsky, KM Murphy, J Sims, E Saldivar, ... Nature plants 6 (11), 1375-1388, 2020 | 56 | 2020 |
Selection, genome‐wide fitness effects and evolutionary rates in the model legume Medicago truncatula T Paape, T Bataillon, P Zhou, T JY Kono, R Briskine, ND Young, P Tiffin Molecular Ecology 22 (13), 3525-3538, 2013 | 56 | 2013 |
Interruption of continuous opioid exposure exacerbates drug-evoked adaptations in the mesolimbic dopamine system EM Lefevre, MT Pisansky, C Toddes, F Baruffaldi, M Pravetoni, L Tian, ... Neuropsychopharmacology 45 (11), 1781-1792, 2020 | 52 | 2020 |
Environmental Association Analyses Identify Candidates for Abiotic Stress Tolerance in Glycine soja, the Wild Progenitor of Cultivated Soybeans JE Anderson, TJY Kono, RM Stupar, MB Kantar, PL Morrell G3: Genes, Genomes, Genetics 6 (4), 835-843, 2016 | 52 | 2016 |
A roadmap for functional structural variants in the soybean genome JE Anderson, MB Kantar, TY Kono, F Fu, AO Stec, Q Song, PB Cregan, ... G3: Genes, Genomes, Genetics 4 (7), 1307-1318, 2014 | 51 | 2014 |
The limited role of differential fractionation in genome content variation and function in maize (Zea mays L.) inbred lines AB Brohammer, TJY Kono, NM Springer, SE McGaugh, CN Hirsch The Plant Journal 93 (1), 131-141, 2018 | 46 | 2018 |
Comparative genomics approaches accurately predict deleterious variants in plants TJY Kono, L Lei, CH Shih, PJ Hoffman, PL Morrell, JC Fay G3: Genes, Genomes, Genetics 8 (10), 3321-3329, 2018 | 45 | 2018 |
Fast neutron-induced structural rearrangements at a soybean NAP1 locus result in gnarled trichomes BW Campbell, AN Hofstad, S Sreekanta, F Fu, TJY Kono, JA O’Rourke, ... Theoretical and Applied Genetics 129, 1725-1738, 2016 | 43 | 2016 |
The genome of the zebra mussel, Dreissena polymorpha: a resource for comparative genomics, invasion genetics, and biocontrol MA McCartney, B Auch, T Kono, S Mallez, Y Zhang, A Obille, A Becker, ... G3 12 (2), jkab423, 2022 | 34* | 2022 |
The home field advantage of modern plant breeding PM Ewing, BC Runck, TYJ Kono, MB Kantar PLoS One 14 (12), e0227079, 2019 | 32 | 2019 |
CHURP: A lightweight CLI framework to enable novice users to analyze sequencing datasets in parallel J Baller, T Kono, A Herman, Y Zhang Proceedings of the Practice and Experience in Advanced Research Computing on …, 2019 | 30 | 2019 |
Nonrandom RNAseq gene expression associated with RNAlater and flash freezing storage methods CN Passow, TJY Kono, BA Stahl, JB Jaggard, AC Keene, SE McGaugh Molecular ecology resources 19 (2), 456-464, 2019 | 30 | 2019 |
Inhalation exposure to cigarette smoke and inflammatory agents induces epigenetic changes in the lung CL Seiler, JM Song, D Kotandeniya, J Chen, TJY Kono, Q Han, M Colwell, ... Scientific reports 10 (1), 11290, 2020 | 26 | 2020 |