Judith E Risse
Judith E Risse
Bioinformatics, Wageningen University
Verified email at wur.nl
Title
Cited by
Cited by
Year
IntAct—open source resource for molecular interaction data
S Kerrien, Y Alam-Faruque, B Aranda, I Bancarz, A Bridge, C Derow, ...
Nucleic acids research 35 (suppl_1), D561-D565, 2007
9042007
A supergene determines highly divergent male reproductive morphs in the ruff
C Küpper, M Stocks, JE Risse, N dos Remedios, LL Farrell, SB McRae, ...
Nature genetics 48 (1), 79-83, 2016
3292016
poRe: an R package for the visualization and analysis of nanopore sequencing data
M Watson, M Thomson, J Risse, R Talbot, J Santoyo-Lopez, K Gharbi, ...
Bioinformatics 31 (1), 114-115, 2015
952015
A single chromosome assembly of Bacteroides fragilis strain BE1 from Illumina and MinION nanopore sequencing data
J Risse, M Thomson, S Patrick, G Blakely, G Koutsovoulos, M Blaxter, ...
Gigascience 4 (1), s13742-015-0101-6, 2015
672015
The long reads ahead: de novo genome assembly using the MinION
C de Lannoy, D de Ridder, J Risse
F1000Research 6, 2017
482017
Field cricket genome reveals the footprint of recent, abrupt adaptation in the wild
S Pascoal, JE Risse, X Zhang, M Blaxter, T Cezard, RJ Challis, K Gharbi, ...
Evolution letters 4 (1), 19-33, 2020
122020
Genomic signatures of historical allopatry and ecological divergence in an island lizard
RP Brown, S Paterson, J Risse
Genome Biology and Evolution 8 (11), 3618-3626, 2016
112016
Opposing patterns of intraspecific and interspecific differentiation in sex chromosomes and autosomes
PA Moran, S Pascoal, T Cezard, JE Risse, MG Ritchie, NW Bailey
Molecular ecology 27 (19), 3905-3924, 2018
92018
Profiling of MicroRNAs in the Biofluids of Livestock Species
J Ioannidis, J Risse, FX Donadeu
MicroRNA Protocols, 65-77, 2018
32018
poreTally: run and publish de novo nanopore assembler benchmarks
C De Lannoy, J Risse, D De Ridder
Bioinformatics 35 (15), 2663-2664, 2019
22019
Catching shufflons in the act: Using nanopore reads to study Bacteroides fragilis
J Risse, M Thomson, M Watson, G Blakely, M Blaxter
F1000Research 4, 2015
22015
A Comparison of Database Systems for XML-Type Data
JE Risse, JAM Leunissen
In silico biology 10 (3, 4), 193-205, 2010
22010
Text mining for metabolic reaction extraction from scientific literature
JE Risse
Wageningen University, 2014
12014
The genetic underpinnings of bill length variation in great tits (Parus major)
JE Risse
ESEB 2019, 2019
2019
Selfishness can be deadly: a recessive lethal inversion is maintained by meiotic drive in great tits
VH da Silva, JE Risse, K van Oers, MFL Derks, VN Laine, M Bosse, ...
Structural variants in the great tit genome and their effect on seasonal …, 0
Evaluation of Metabolic Reaction Extraction from Scientific Literature with a Deep Parsing Approach
JE Risse, PE van der Vet
TEXT MINING FOR METABOLIC REACTION EXTRACTION FROM SCIENTIFIC LITERATURE, 55, 0
Two Thesauri for Identifying Enzymes and Metabolites in Text
JE Risse, H Nijveen, PE van der Vet
TEXT MINING FOR METABOLIC REACTION EXTRACTION FROM SCIENTIFIC LITERATURE, 37, 0
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