Mutsumi Nishida
Mutsumi Nishida
Vice President, University of the Ryukyus / Professor Emeritus, The University of Tokyo
Verified email at aori.u-tokyo.ac.jp
Title
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Year
Major patterns of higher teleostean phylogenies: a new perspective based on 100 complete mitochondrial DNA sequences
M Miya, H Takeshima, H Endo, NB Ishiguro, JG Inoue, T Mukai, TP Satoh, ...
Molecular phylogenetics and evolution 26 (1), 121-138, 2003
8002003
MitoFish and MitoAnnotator: a mitochondrial genome database of fish with an accurate and automatic annotation pipeline
W Iwasaki, T Fukunaga, R Isagozawa, K Yamada, Y Maeda, TP Satoh, ...
Molecular biology and evolution 30 (11), 2531-2540, 2013
4612013
Sequence evolution of mitochondrial tRNA genes and deep-branch animal phylogenetics
Y Kumazawa, M Nishida
Journal of Molecular Evolution 37 (4), 380-398, 1993
4061993
Mitogenomic exploration of higher teleostean phylogenies: a case study for moderate-scale evolutionary genomics with 38 newly determined complete mitochondrial DNA sequences
M Miya, A Kawaguchi, M Nishida
Molecular Biology and Evolution 18 (11), 1993-2009, 2001
3982001
Use of mitogenomic information in teleostean molecular phylogenetics: a tree-based exploration under the maximum-parsimony optimality criterion
M Miya, M Nishida
Molecular Phylogenetics and Evolution 17 (3), 437-455, 2000
3902000
Mitogenomic evolution and interrelationships of the Cypriniformes (Actinopterygii: Ostariophysi): the first evidence toward resolution of higher-level relationships of the …
K Saitoh, T Sado, RL Mayden, N Hanzawa, K Nakamura, M Nishida, ...
Journal of molecular evolution 63 (6), 826-841, 2006
3332006
Basal actinopterygian relationships: a mitogenomic perspective on the phylogeny of the “ancient fish”
JG Inoue, M Miya, K Tsukamoto, M Nishida
Molecular phylogenetics and evolution 26 (1), 110-120, 2003
3322003
Organization of the mitochondrial genome of a deep-sea fish, Gonostoma gracile (Teleostei: Stomiiformes): first example of transfer RNA gene rearrangements in bony fishes
M Miya, M Nishida
Marine Biotechnology 1 (5), 416-426, 1999
3251999
Complete mitochondrial DNA sequences of the green turtle and blue-tailed mole skink: statistical evidence for archosaurian affinity of turtles.
Y Kumazawa, M Nishida
Molecular Biology and Evolution 16 (6), 784-792, 1999
2701999
The complete nucleotide sequence of a snake (Dinodon semicarinatus) mitochondrial genome with two identical control regions
Y Kumazawa, H Ota, M Nishida, T Ozawa
Genetics 150 (1), 313-329, 1998
2621998
A mitogenomic perspective on the basal teleostean phylogeny: resolving higher-level relationships with longer DNA sequences
JG Inoue, M Miya, K Tsukamoto, M Nishida
Molecular phylogenetics and evolution 20 (2), 275-285, 2001
2392001
Mitochondrial genomics of ostariophysan fishes: perspectives on phylogeny and biogeography
K Saitoh, M Miya, JG Inoue, NB Ishiguro, M Nishida
Journal of Molecular Evolution 56 (4), 464-472, 2003
2172003
Basal euteleostean relationships: a mitogenomic perspective on the phylogenetic reality of the “Protacanthopterygii”
NB Ishiguro, M Miya, M Nishida
Molecular phylogenetics and evolution 27 (3), 476-488, 2003
2132003
Phylogenetic relationships and ancient incomplete lineage sorting among cichlid fishes in Lake Tanganyika as revealed by analysis of the insertion of retroposons
K Takahashi, Y Terai, M Nishida, N Okada
Molecular Biology and Evolution 18 (11), 2057-2066, 2001
2092001
Gene rearrangements in snake mitochondrial genomes: highly concerted evolution of control-region-like sequences duplicated and inserted into a tRNA gene cluster.
Y Kumazawa, H Ota, M Nishida, T Ozawa
Molecular Biology and Evolution 13 (9), 1242-1254, 1996
2071996
Molecular phylogeny and evolution of the freshwater eels genus Anguilla based on the whole mitochondrial genome sequences
Y Minegishi, J Aoyama, JG Inoue, M Miya, M Nishida, K Tsukamoto
Molecular Phylogenetics and Evolution 34 (1), 134-146, 2005
1892005
Complete mitochondrial DNA sequence of the Japanese sardine Sardinops melanostictus
JG Inoue, M Miya, K Tsukamoto, M Nishida
Fisheries science 66 (5), 924-932, 2000
1892000
Evolutionary history of Otophysi (Teleostei), a major clade of the modern freshwater fishes: Pangaean origin and Mesozoic radiation
M Nakatani, M Miya, K Mabuchi, K Saitoh, M Nishida
BMC evolutionary biology 11 (1), 1-25, 2011
1652011
Variations in mitochondrial tRNA gene organization of reptiles as phylogenetic markers.
Y Kumazawa, M Nishida
Molecular Biology and Evolution 12 (5), 759-772, 1995
1621995
Mitogenomic evaluation of the historical biogeography of cichlids toward reliable dating of teleostean divergences
Y Azuma, Y Kumazawa, M Miya, K Mabuchi, M Nishida
BMC Evolutionary Biology 8 (1), 1-13, 2008
1602008
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