| Initial sequencing and comparative analysis of the mouse genome European Bioinformatics Institute: Birney Ewan 3 Goldman Nick 3 Kasprzyk ... Nature 420 (6915), 520-562, 2002 | 8546 | 2002 |
| Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project Management Group Liefer Laura A. 51 Wetterstrand Kris A. 51 Good Peter J. 51 ... nature 447 (7146), 799-816, 2007 | 6009 | 2007 |
| Genome sequence, comparative analysis and haplotype structure of the domestic dog K Lindblad-Toh, CM Wade, TS Mikkelsen, EK Karlsson, DB Jaffe, ... Nature 438 (7069), 803-819, 2005 | 3109 | 2005 |
| Initial sequence of the chimpanzee genome and comparison with the human genome Chimpanzee Sequencing and Analysis Consortium Waterson Robert H. waterston ... Nature 437 (7055), 69-87, 2005 | 2305 | 2005 |
| Evolution of genes and genomes on the Drosophila phylogeny AG Clark, MB Eisen, DR Smith, CM Bergman, B Oliver, TA Markow, ... Nature 450 (7167), 203-18, 2007 | 2254 | 2007 |
| The genome sequence of the filamentous fungus Neurospora crassa JE Galagan, SE Calvo, KA Borkovich, EU Selker, ND Read, D Jaffe, ... Nature 422 (6934), 859-868, 2003 | 1994 | 2003 |
| High-quality draft assemblies of mammalian genomes from massively parallel sequence data S Gnerre, I MacCallum, D Przybylski, FJ Ribeiro, JN Burton, BJ Walker, ... Proceedings of the National Academy of Sciences 108 (4), 1513-1518, 2011 | 1888 | 2011 |
| Genome sequence and analysis of the Irish potato famine pathogen Phytophthora infestans BJ Haas, S Kamoun, MC Zody, RHY Jiang, RE Handsaker, LM Cano, ... Nature 461 (7262), 393-398, 2009 | 1664 | 2009 |
| A high-resolution map of human evolutionary constraint using 29 mammals K Lindblad-Toh, M Garber, O Zuk, MF Lin, BJ Parker, S Washietl, ... Nature 478 (7370), 476-482, 2011 | 1245 | 2011 |
| The Fusarium graminearum Genome Reveals a Link Between Localized Polymorphism and Pathogen Specialization CA Cuomo, U Güldener, JR Xu, F Trail, BG Turgeon, A Di Pietro, ... Science 317 (5843), 1400-1402, 2007 | 1015 | 2007 |
| The genomic substrate for adaptive radiation in African cichlid fish D Brawand, CE Wagner, YI Li, M Malinsky, I Keller, S Fan, O Simakov, ... Nature 513 (7518), 375-381, 2014 | 1006 | 2014 |
| Sensitive and specific multi-cancer detection and localization using methylation signatures in cell-free DNA MC Liu, GR Oxnard, EA Klein, C Swanton, MV Seiden, MC Liu, ... Annals of Oncology 31 (6), 745-759, 2020 | 966 | 2020 |
| Genome sequence, comparative analysis, and population genetics of the domestic horse CM Wade, E Giulotto, S Sigurdsson, M Zoli, S Gnerre, F Imsland, TL Lear, ... Science 326 (5954), 865-867, 2009 | 888 | 2009 |
| Assemblathon 2: evaluating de novo methods of genome assembly in three vertebrate species KR Bradnam, JN Fass, A Alexandrov, P Baranay, M Bechner, I Birol, ... Gigascience 2 (1), 2047-217X-2-10, 2013 | 794 | 2013 |
| ARACHNE: a whole-genome shotgun assembler S Batzoglou, DB Jaffe, K Stanley, J Butler, S Gnerre, E Mauceli, B Berger, ... Genome research 12 (1), 177-189, 2002 | 784 | 2002 |
| Genome of the marsupial Monodelphis domestica reveals innovation in non-coding sequences TS Mikkelsen, MJ Wakefield, B Aken, CT Amemiya, JL Chang, S Duke, ... Nature 447 (7141), 167-177, 2007 | 774 | 2007 |
| Genetic evidence for complex speciation of humans and chimpanzees N Patterson, DJ Richter, S Gnerre, ES Lander, D Reich Nature 441 (7097), 1103-1108, 2006 | 757 | 2006 |
| The African coelacanth genome provides insights into tetrapod evolution CT Amemiya, J Alföldi, AP Lee, S Fan, H Philippe, I MacCallum, I Braasch, ... Nature 496 (7445), 311-316, 2013 | 743 | 2013 |
| Assemblathon 1: a competitive assessment of de novo short read assembly methods D Earl, K Bradnam, JS John, A Darling, D Lin, J Fass, HOK Yu, V Buffalo, ... Genome research 21 (12), 2224-2241, 2011 | 632 | 2011 |
| High-intensity sequencing reveals the sources of plasma circulating cell-free DNA variants P Razavi, BT Li, DN Brown, B Jung, E Hubbell, R Shen, W Abida, K Juluru, ... Nature medicine 25 (12), 1928-1937, 2019 | 543 | 2019 |
