Jan Niklas Macher
Jan Niklas Macher
Naturalis Biodiversity Center, Marine Biodiversity Group
Verified email at naturalis.nl
Title
Cited by
Cited by
Year
DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work
H Weigand, AJ Beermann, F Čiampor, FO Costa, Z Csabai, S Duarte, ...
Science of the Total Environment 678, 499-524, 2019
1342019
Molecular evidence for further overlooked species within the Gammarus fossarum complex (Crustacea: Amphipoda)
M Weiss, JN Macher, MA Seefeldt, F Leese
Hydrobiologia 721 (1), 165-184, 2014
882014
Multiple-stressor effects on stream invertebrates: DNA barcoding reveals contrasting responses of cryptic mayfly species
JN Macher, RK Salis, KS Blakemore, R Tollrian, CD Matthaei, F Leese
Ecological Indicators 61, 159-169, 2016
752016
Comparison of environmental DNA and bulk‐sample metabarcoding using highly degenerate cytochrome c oxidase I primers
JN Macher, A Vivancos, JJ Piggott, FC Centeno, CD Matthaei, F Leese
Molecular ecology resources 18 (6), 1456-1468, 2018
582018
Drastic underestimation of amphipod biodiversity in the endangered Irano-Anatolian and Caucasus biodiversity hotspots
AR Katouzian, A Sari, JN Macher, M Weiss, A Saboori, F Leese, ...
Scientific Reports 6, 22507, 2016
462016
Exploring Pandora's box: potential and pitfalls of low coverage genome surveys for evolutionary biology
F Leese, P Brand, A Rozenberg, C Mayer, S Agrawal, J Dambach, L Dietz, ...
PloS one 7 (11), e49202, 2012
272012
Assessing the phylogeographic history of the montane caddisfly Thremma gallicum using mitochondrial and restriction‐site‐associated DNA (RAD) markers
JN Macher, A Rozenberg, SU Pauls, R Tollrian, R Wagner, F Leese
Ecology and evolution 5 (3), 648-662, 2015
262015
Environmental DNA metabarcoding of rivers: Not all eDNA is everywhere, and not all the time
JN Macher, F Leese
BioRxiv, 164046, 2017
222017
A DNA metabarcoding protocol for hyporheic freshwater meiofauna: Evaluating highly degenerate COI primers and replication strategy
AM Weigand, JN Macher
Metabarcoding and Metagenomics 2, e26869, 2018
202018
Advancing the use of molecular methods for routine freshwater macroinvertebrate biomonitoring–the need for calibration experiments
RC Blackman, E Mächler, F Altermatt, A Arnold, P Beja, P Boets, B Egeter, ...
Metabarcoding and Metagenomics 3, 49-57, 2019
192019
A simple centrifugation protocol for metagenomic studies increases mitochondrial DNA yield by two orders of magnitude
JN Macher, VMA Zizka, AM Weigand, F Leese
Methods in Ecology and Evolution, 2017
152017
Assessing the influence of sample tagging and library preparation on DNA metabarcoding
VMA Zizka, V Elbrecht, JN Macher, F Leese
Molecular ecology resources 19 (4), 893-899, 2019
142019
Combining NCBI and BOLD databases for OTU assignment in metabarcoding and metagenomic datasets: The BOLD_NCBI _Merger
JN Macher, TH Macher, F Leese
Metabarcoding and Metagenomics 1, e22262, 2017
102017
Cryptic diversity and population structure at small scales: The freshwater snail Ancylus (Planorbidae, Pulmonata) in the Montseny mountain range
JN Macher, M Weiss, A Beermann, F Leese
Annales de Limnologie - International Journal of Limnology 52, 387-399, 2016
82016
DNA barcode reference libraries for the monitoring of aquatic biota in Europe: Gap-analysis and recommendations for future work. Science of the Total Environment678: 499-524
H Weigand, AJ Beermann, F Ciampor, FO Costa, Z Csabai, S Duarte, ...
72019
The complete mitochondrial genome of a cryptic amphipod species from the Gammarus fossarum complex
JN Macher, F Leese, AM Weigand, A Rozenberg
Mitochondrial DNA Part B 2 (1), 17-18, 2017
52017
Using environmental DNA to monitor the reintroduction success of the Rhine sculpin (Cottus rhenanus) in a restored stream
CA Hempel, B Peinert, AJ Beermann, V Elbrecht, JN Macher, TH Macher, ...
Frontiers in Ecology and Evolution 8, 81, 2020
42020
Uncovering bacterial and functional diversity in macroinvertebrate mitochondrial-metagenomic datasets by differential centrifugation
JN Macher, A Speksnijder, LQ Choo, B van Der Hoorn, W Renema
Scientific reports 9 (1), 1-9, 2019
22019
New molecular methods to assess biodiversity. Potentials and pitfalls of DNA metabarcoding: a workshop report
M Kahlert, A Alfjorden, K Apunte-Ramos, B Bailet, JP Burillo, ...
22019
eDNA metabarcoding of rivers: Is all eDNA everywhere, all the time?
JN Macher, F Leese
ECCB2018: 5th European Congress of Conservation Biology. 12th-15th of June …, 2018
12018
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